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Dataset summary: Dengue¶

Report generated using dataprep.

Dengue dataset report

Overview

Dataset Statistics

Number of Variables	14
Number of Rows	124897
Missing Cells	513559
Missing Cells (%)	29.4%
Duplicate Rows	63027
Duplicate Rows (%)	50.5%
Total Size in Memory	46.3 MB
Average Row Size in Memory	388.9 B

Variable Types

Categorical	9
Numerical	5

Variables

abdominal_pain

categorical

Distinct Count	2
Unique (%)	0.0%
Missing	13921
Missing (%)	11.2%
Memory Size	7.4 MB

Stats Plots

Length

Mean	4.7556
Standard Deviation	0.4297
Median	5
Minimum	4
Maximum	5

Sample

1st row	False
2nd row	False
3rd row	False
4th row	False
5th row	False

Letter

Count	527762
Lowercase Letter	416786
Space Separator	0
Uppercase Letter	110976
Dash Punctuation	0
Decimal Number	0

age

numerical

Distinct Count	133
Unique (%)	0.1%
Missing	213
Missing (%)	0.2%
Infinite	0
Infinite (%)	0.0%
Memory Size	1.9 MB
Mean	10.7163
Minimum	0
Maximum	88
Zeros	33
Zeros (%)	0.0%
Negatives	0
Negatives (%)	0.0%

Stats Plots

Quantile Statistics

Minimum	0
5-th Percentile	2
Q1	6
Median	10
Q3	13
95-th Percentile	26
Maximum	88
Range	88
IQR	7

Descriptive Statistics

Mean	10.7163
Standard Deviation	7.2255
Variance	52.2085
Sum	1.3361e+06
Skewness	2.4783
Kurtosis	11.9615
Coefficient of Variation	0.6743

ascites

categorical

Distinct Count	2
Unique (%)	0.0%
Missing	50783
Missing (%)	40.7%
Memory Size	4.9 MB

Stats Plots

Length

Mean	4.9615
Standard Deviation	0.1924
Median	5
Minimum	4
Maximum	5

Sample

1st row	False
2nd row	False
3rd row	False
4th row	False
5th row	False

Letter

Count	367716
Lowercase Letter	293602
Space Separator	0
Uppercase Letter	74114
Dash Punctuation	0
Decimal Number	0

bleeding_gum

categorical

Distinct Count	2
Unique (%)	0.0%
Missing	50751
Missing (%)	40.6%
Memory Size	4.9 MB

Stats Plots

Length

Mean	4.9652
Standard Deviation	0.1833
Median	5
Minimum	4
Maximum	5

Sample

1st row	False
2nd row	False
3rd row	False
4th row	False
5th row	False

Letter

Count	368148
Lowercase Letter	294002
Space Separator	0
Uppercase Letter	74146
Dash Punctuation	0
Decimal Number	0

bleeding_mucosal

categorical

Distinct Count	2
Unique (%)	0.0%
Missing	23383
Missing (%)	18.7%
Memory Size	6.8 MB

Stats Plots

Length

Mean	4.8933
Standard Deviation	0.3088
Median	5
Minimum	4
Maximum	5

Sample

1st row	False
2nd row	False
3rd row	False
4th row	False
5th row	False

Letter

Count	496736
Lowercase Letter	395222
Space Separator	0
Uppercase Letter	101514
Dash Punctuation	0
Decimal Number	0

bleeding_skin

categorical

Distinct Count	2
Unique (%)	0.0%
Missing	57870
Missing (%)	46.3%
Memory Size	4.5 MB

Stats Plots

Length

Mean	4.7434
Standard Deviation	0.4368
Median	5
Minimum	4
Maximum	5

Sample

1st row	False
2nd row	False
3rd row	False
4th row	False
5th row	False

Letter

Count	317933
Lowercase Letter	250906
Space Separator	0
Uppercase Letter	67027
Dash Punctuation	0
Decimal Number	0

body_temperature

numerical

Distinct Count	529
Unique (%)	2.0%
Missing	97812
Missing (%)	78.3%
Infinite	0
Infinite (%)	0.0%
Memory Size	423.2 KB
Mean	37.7906
Minimum	35
Maximum	41.5
Zeros	0
Zeros (%)	0.0%
Negatives	0
Negatives (%)	0.0%

Stats Plots

Quantile Statistics

Minimum	35
5-th Percentile	37
Q1	37
Median	37.5
Q3	38.5
95-th Percentile	39.5
Maximum	41.5
Range	6.5
IQR	1.5

Descriptive Statistics

Mean	37.7906
Standard Deviation	0.9069
Variance	0.8224
Sum	1.0236e+06
Skewness	0.9686
Kurtosis	0.01539
Coefficient of Variation	0.024

gender

categorical

Distinct Count	2
Unique (%)	0.0%
Missing	173
Missing (%)	0.1%
Memory Size	8.3 MB

Stats Plots

Length

Mean	4.9238
Standard Deviation	0.9971
Median	4
Minimum	4
Maximum	6

Sample

1st row	Female
2nd row	Female
3rd row	Female
4th row	Female
5th row	Female

Letter

Count	614116
Lowercase Letter	489392
Space Separator	0
Uppercase Letter	124724
Dash Punctuation	0
Decimal Number	0

haematocrit_percent

numerical

Distinct Count	1060
Unique (%)	2.3%
Missing	77905
Missing (%)	62.4%
Infinite	0
Infinite (%)	0.0%
Memory Size	734.2 KB
Mean	39.862
Minimum	1
Maximum	74.4
Zeros	0
Zeros (%)	0.0%
Negatives	0
Negatives (%)	0.0%

Stats Plots

Quantile Statistics

Minimum	1
5-th Percentile	32.8
Q1	36.7
Median	39.4
Q3	42.5
95-th Percentile	49
Maximum	74.4
Range	73.4
IQR	5.8

Descriptive Statistics

Mean	39.862
Standard Deviation	4.93
Variance	24.3053
Sum	1.8732e+06
Skewness	0.5428
Kurtosis	1.522
Coefficient of Variation	0.1237

plt

numerical

Distinct Count	2333
Unique (%)	5.0%
Missing	78088
Missing (%)	62.5%
Infinite	0
Infinite (%)	0.0%
Memory Size	731.4 KB
Mean	5484.7121
Minimum	1
Maximum	268768.5
Zeros	0
Zeros (%)	0.0%
Negatives	0
Negatives (%)	0.0%

Stats Plots

Quantile Statistics

Minimum	1
5-th Percentile	27
Q1	83
Median	159
Q3	257
95-th Percentile	50050
Maximum	268768.5
Range	268767.5
IQR	174

Descriptive Statistics

Mean	5484.7121
Standard Deviation	21859.904
Variance	4.7786e+08
Sum	2.5673e+08
Skewness	4.9072
Kurtosis	27.284
Coefficient of Variation	3.9856

weight

numerical

Distinct Count	324
Unique (%)	0.3%
Missing	545
Missing (%)	0.4%
Infinite	0
Infinite (%)	0.0%
Memory Size	1.9 MB
Mean	32.1729
Minimum	7.2
Maximum	114
Zeros	0
Zeros (%)	0.0%
Negatives	0
Negatives (%)	0.0%

Stats Plots

Quantile Statistics

Minimum	7.2
5-th Percentile	13
Q1	21
Median	30
Q3	42
95-th Percentile	58
Maximum	114
Range	106.8
IQR	21

Descriptive Statistics

Mean	32.1729
Standard Deviation	14.3309
Variance	205.3754
Sum	4.0008e+06
Skewness	0.695
Kurtosis	0.2718
Coefficient of Variation	0.4454

bleeding

categorical

Distinct Count	2
Unique (%)	0.0%
Missing	61556
Missing (%)	49.3%
Memory Size	4.2 MB

Stats Plots

Length

Mean	4.5694
Standard Deviation	0.4952
Median	5
Minimum	4
Maximum	5

Sample

1st row	False
2nd row	False
3rd row	False
4th row	False
5th row	False

Letter

Count	289431
Lowercase Letter	226090
Space Separator	0
Uppercase Letter	63341
Dash Punctuation	0
Decimal Number	0

shock

categorical

Distinct Count	2
Unique (%)	0.0%
Missing	559
Missing (%)	0.4%
Memory Size	8.3 MB

Stats Plots

Length

Mean	4.9413
Standard Deviation	0.2351
Median	5
Minimum	4
Maximum	5

Sample

1st row	True
2nd row	True
3rd row	True
4th row	True
5th row	True

Letter

Count	614387
Lowercase Letter	490049
Space Separator	0
Uppercase Letter	124338
Dash Punctuation	0
Decimal Number	0

dsource

categorical

Distinct Count	10
Unique (%)	0.0%
Missing	0
Missing (%)	0.0%
Memory Size	8.1 MB

Stats Plots

Length

Mean	3.0035
Standard Deviation	1.0155
Median	2
Minimum	2
Maximum	5

Sample

1st row	01nva
2nd row	01nva
3rd row	01nva
4th row	01nva
5th row	01nva

Letter

Count	250201
Lowercase Letter	250201
Space Separator	0
Uppercase Letter	0
Dash Punctuation	0
Decimal Number	124924

Interactions

Correlations

Missing Values

 from dataprep.eda import create_report
 from pkgname.utils.data_loader import load_dengue
 from pkgname.utils.print_utils import suppress_stdout, suppress_stderr

 features = ["dsource", "age", "gender", "weight", "bleeding", "plt",
             "shock", "haematocrit_percent", "bleeding_gum", "abdominal_pain",
             "ascites", "bleeding_mucosal", "bleeding_skin", "body_temperature"]

 with suppress_stdout() and suppress_stderr():
     df = load_dengue(usecols=features)
     report = create_report(df, title="Dengue dataset report")

 report

Total running time of the script: ( 0 minutes 5.438 seconds)

Download Python source code: plot_data_summary_dengue_raw.py

Download Jupyter notebook: plot_data_summary_dengue_raw.ipynb

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